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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827224.1_cds_XP_016502997.1_16581
CDS Infomation

[gene=LOC107821108] [db_xref=GeneID:107821108] [protein=synaptotagmin-5-like] [protein_id=XP_016502997.1] [location=complement(join(29932..30075,30248..30361,30467..30748,37608..37838,37927..38077,38694..38773,38972..39046,39331..39432,39779..39900,40322..40442,41800..41850,41954..42058,42152..42256))] [gbkey=CDS]
Sequence

ATGGGTTTGTTGGTGGGGTTCTTCTTAGGTGCTGCATTGGGTGTTGGTCTGATAGTTTGT
TTTGCTCGTTTTCAAAATAACAGATCCAAAGCTCGCATTGATTTGGCAAAAGCCATAGCA
GCATTTGCCAGGATGACAGTTCAAGATTCAAGAAAACTTCTTCCTCCTGAAGCATACCCT
TCTTGGGTTGTCTTTTCACAGAAGCAAAAGTTGAATTGGCTTAACCAGCACTTAGAAAAA
ATCTGGCCTTATGTTGATGAGGCAGCATCAGAGTTGATAAGAACATCTGTTGAGCCAGTC
CTTGAGCAATATAGACCATCTATCTTAGCTGCTCTCAAATTTTCAAAGCTCACATTGGGT
ACTGTTGCTCCATCCTTCACAGGAGTTTCTATTATTGATGGTGATCCTGGGGAAATTATT
ATGGAATTGGAAATGCAGTGGGATGGAAATCCTAATATTGTGCTAGATATTAAGACTTTA
GTTGGTGTCGCACTACCTATACAGGTCAAGAATATCGGATTCACTGGGGTTTTCCGGTTG
ATATTCAAACCACTAGTTGCTGAGCTTCCTTGTTTTGGAGCGGTTTGTTACTCCTTGCGT
CAAAAGAAAAATCTGGATTTCACTCTCAAAGTTGTGGGTGGTGATATCTCGGCTCTTCCC
GGAGTATCTGATGCCATTGAGGGTACAATACGGGATGCAATTGAAGATTCTATCACTTGG
CCTGTCCGCAAAATCGTTCCCATATTACCAGGAGACTATAGTGACCTGGAGCTAAAGCCG
GTTGGTATATTACAAGTCAAGCTCATCGAAGCCAAAGAGTTGACTAATAAAGACATCATT
GGGAAGTCTGATCCTTTTGTTGAGTTGTTTATACGTCCACTACGTGACAGGACAAAGACC
AGCAAAGTTATTGATAACTGCTTAAATCCGATCTGGAATGAGCACTTTGAGTTCATAGTT
GAAGACATATCCACTCAACATATAACAATTAGAGTTTATGATGATGAAGGGATTCAGGCT
GCTGAATTCATTGGTTGTGCTCGAATAGATTTGAAAGACCTTGAGCCCGGTAAAGTGAAG
GATGTGTGGCTGAAACTGGTGAAGGATCTGGAGATACAAAGGGACAACAAAAATCGAGGA
CAGGTACACTTGGAGCTTCTCTTTTGTCCTTTTGGTATGGATAGTGTGTTTATGAAGGGG
TTTAAACCCGACTACGCACTAACTACCTTGGAAAAGGCCCTTAGACCCGAGTCGGCTAAT
TTTTCACAAGCGGTCTCTGAGAAGAAAGGGGACATCCTCTTTAGAGGAGTTCTTTCTGTG
ACAGTAATATCAGCAGAAGACCTACCTGTTACTGATCTAATGGGGAAGTCTGATCCTTTT
GTTGTACTAATTATGAAGAAATCTGAACAGAAAAATAAGACCAGAGTTCTAAACAACACT
CTTAATCCAGTGTGGAACCAGACATTTGACTTTGTAGTTGAAGATGGATTACATGATTTG
CTCATATTGGAAGTTTGGGACCATGACACATTTGGGAAGGATAAAATTGGTAGATGCATC
ATGACTCTCACAAGAGTTATACTAGAAGGGGAATTCAAAGATACCTTCACCCTTGATGGT
GCCAAGTCGGGGAGATTAACTGTTCATCTTAAATGGGCACCACAACCAATAATTCGAGAT
TGA

Peptide Sequence

PEP ID

XP_016502997.1
PEP Infomation

PREDICTED: synaptotagmin-5-like [Nicotiana tabacum]
Sequence

MGLLVGFFLGAALGVGLIVCFARFQNNRSKARIDLAKAIAAFARMTVQDSRKLLPPEAYP
SWVVFSQKQKLNWLNQHLEKIWPYVDEAASELIRTSVEPVLEQYRPSILAALKFSKLTLG
TVAPSFTGVSIIDGDPGEIIMELEMQWDGNPNIVLDIKTLVGVALPIQVKNIGFTGVFRL
IFKPLVAELPCFGAVCYSLRQKKNLDFTLKVVGGDISALPGVSDAIEGTIRDAIEDSITW
PVRKIVPILPGDYSDLELKPVGILQVKLIEAKELTNKDIIGKSDPFVELFIRPLRDRTKT
SKVIDNCLNPIWNEHFEFIVEDISTQHITIRVYDDEGIQAAEFIGCARIDLKDLEPGKVK
DVWLKLVKDLEIQRDNKNRGQVHLELLFCPFGMDSVFMKGFKPDYALTTLEKALRPESAN
FSQAVSEKKGDILFRGVLSVTVISAEDLPVTDLMGKSDPFVVLIMKKSEQKNKTRVLNNT
LNPVWNQTFDFVVEDGLHDLLILEVWDHDTFGKDKIGRCIMTLTRVILEGEFKDTFTLDG
AKSGRLTVHLKWAPQPIIRD

Transcript Sequence

Gene sequence data has not been registered.